According to Ashitaka of the Lain mailing list, the Kanji sound for 'Rein' means 'the sound of jewels. 'Iwakura' is the name of a samurai group serving under Iwakura Tomomi. The Meji emperor sent the samurai to Europe to study European culture in 1872-73. Gn0sis informs me that Iwakura literally means: 'Stone Warehouse'.

These are the names of Iwakura Lain in Japanese:

Romaji: Iwakura Rein

Kanji:岩倉玲音

Hiragana: ぃわくられぃん

Katakana:ィヮクラレィン

Thanks to Ashitaka of the Lain mailinglist.